In order to replicate in an infected cell, viruses must be assembled and released as stable particles. Conversely, when they enter cells that are to be newly infected, they have to disintegrate to release their genetic information. In enveloped viruses such as TBE virus, the control of these opposing processes is based on the ability of viral envelope proteins to change their structure and become activated at different stages of the virus life cycle. In the case of flaviviruses, these conformational switches are triggered by the varying pH in different cellular compartments.
X-ray structural analysis of an envelope protein complex
To investigate the mechanisms of pH-dependent virus stabilisation and activation of TBE virus, a complex of the viral envelope protein E and a second membrane protein (prM), which is only found in immature forms of the virus and is cleaved during virus maturation, was artificially generated and crystallised at acidic pH. The researchers identified a flexible sequence element ('150 loop') in the E protein that acts as a molecular switch, opening like a hinged lid at acidic pH but closing again at neutral pH. This structure therefore performs a key function in the molecular control of processes dependent on acidic pH during viral entry into the cell (which, however, has to be prevented during egress), thus creating the preconditions for a successful infection process.
Elucidation of the atomic structure of the prM protein, which is only present in immature, non-infectious viruses, also provided the study team led by Karin Stiasny and Franz X. Heinz at the Medical University of Vienna's Center for Virology and structural biologist Felix A. Rey at the Pasteur Institute in Paris new insights into the evolution of flaviviruses. Indeed, structural homology analyses revealed that, in all flaviviruses, this protein derives from a cellular chaperone (a highly conserved cellular protein) whose genetic information was incorporated into that of the virus by horizontal gene transfer in the course of virus evolution, thereby facilitating the evolution of a unique mechanism of morphogenesis and infectivity activation.
The insights from this basic research expand our molecular understanding of the replication of major human pathogenic viruses and may contribute to the development of antiviral strategies.
Publication: Nature Communications
Evolution and activation mechanism of the flavivirus class II membrane-fusion machinery
Vaney M-C, Dellarole M, Duquerroy S, Medits I, Tsouchnikas G, Rouvinski A, England P, Stiasny K, Heinz FX, Rey FA.
Nature Communications 13:3718.
FWF funding: I1378-B13 and P27501-B21